N-Terminus to Arginine Side-Chain Cyclization of Linear Peptidic Neuropeptide Y Y4 Receptor Ligands Results in Picomolar Binding Constants

J Med Chem. 2021 Nov 25;64(22):16746-16769. doi: 10.1021/acs.jmedchem.1c01574. Epub 2021 Nov 8.

Abstract

The family of neuropeptide Y (NPY) receptors comprises four subtypes (Y1R, Y2R, Y4R, Y5R), which are addressed by at least three endogenous peptides, i.e., NPY, peptide YY, and pancreatic polypeptide (PP), the latter showing a preference for Y4R. A series of cyclic oligopeptidic Y4R ligands were prepared by applying a novel approach, i.e., N-terminus to arginine side-chain cyclization. Most peptides acted as Y4R partial agonists, showing up to 60-fold higher Y4R affinity compared to the linear precursor peptides. Two cyclic hexapeptides (18, 24) showed higher Y4R potency (Ca2+ aequorin assay) and, with pKi values >10, also higher Y4R affinity compared to human pancreatic polypeptide (hPP). Compounds such as 18 and 24, exhibiting considerably lower molecular weight and considerably more pronounced Y4R selectivity than PP and previously described dimeric peptidic ligands with high Y4R affinity, represent promising leads for the preparation of labeled tool compounds and might support the development of drug-like Y4R ligands.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Arginine / chemistry*
  • Cyclization
  • HEK293 Cells
  • Humans
  • Ligands
  • Molecular Docking Simulation
  • Neuropeptide Y / metabolism*
  • Protein Binding
  • Receptors, Neuropeptide Y / chemistry
  • Receptors, Neuropeptide Y / metabolism*

Substances

  • Ligands
  • Neuropeptide Y
  • Receptors, Neuropeptide Y
  • neuropeptide Y4 receptor
  • Arginine